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. 2021 Jan 11;11:601566. doi: 10.3389/fgene.2020.601566

TABLE 2.

The summary report of data analysis from the WES.

Analytical characteristic Patient 1 (Proband IV-2) Patient 2 (Proband IV-1) Patient 3 (Proband V-3)
Total number of reads 74,227,000 55,298,288 72,367,238
Average read length (bp) 101 101 101
Target Region (Mbp) 60 60 60
% Bases QV>30 98.26 98.59 98.15
% Initial Mappable Reads 99 99 99
% Minimum coverage of target regions (for depth 1X, 5X and 10X) 99.8, 99.4 and 98.6 99.7, 99.2 and 97.4 97.8, 97.3 and 96.3
% of duplicate reads (pre-alignment) 24 20.5 29.24
% of duplicate reads (post-alignment) 6 5 8.7
% On Target Reads (post-alignment) 72 70 77
% Coverage >25X 91.34 81.77 88.41
% Coverage >50X 62.97 45.94 60.94
# of SNV 126,424 117,459 117,960
# of Stop Gained 90 104 91
# of Indels 12,603 10,527 11,116