Table 2.
Predicted developmental genes in T. bryosalmonae with closest manually annotated sequence by species given alongside predicted protein domains, namely; signal peptide (SP), frizzled (Fz) and smoothened (Sm).
| Accession number | Gene name (contig number) | Closest species (accession no.) | E value (BlastX) | %AT | ORF (AA) | Protein domains/motifs |
|---|---|---|---|---|---|---|
| MN056840 | Homeobox protein, Xenk-2 (C-2190) | Amphibalanus amphitrite (KAF0307692.1) | 4e−17 | 75 | 196 (FL) | 1 × Homeobox |
| MN056845 | Homeobox protein, Anf-1-like (C-8582) | Gallus gallus (P79775) | 5e−12 | 73 | 199 (FL) | 1 × Homeobox |
| MN056841 | Retinal homeobox-1 (Rx-1) (C-972) | Mus musculus (P80206) | 9e−08 | 72 | 182 (FL) | 1 × Homeobox |
| MN056842 | Homeobox protein, OTX-2 (C-18561) | Mus musculus (P80206) | 1e−13 | 68 | 345 (FL) | 1 × Homeobox |
| MN056843 | Homeobox protein, Sebox (C-4608) | Callorhinchus milii (XP_007894674) | 6e−02 | 73 | 213 (FL) | 1 × Homeobox |
| MN056844 | Homeobox protein, Ceh11 (C-44466)* | Caenorhabditis elegans (P17486) | 1e−12 | 71 | 93 (P) | 1 × Homeobox |
| MN056859 | Frizzled receptor-2 (C-2600) | Caenorhabditis elegans (G5ECQ2) | 2e−17 | 72 | 613 (P) | Sp, 1 × Fz domain, 1 × Fz/Sm membrane region |