Table 1.

Sample annotation, fractions and acquired peptide amount.

PRIDE File No.	Retina No.	Sample Type	Fraction	Data Type	Technical Replicate	Injection Volume (ul)	Peptide Amount (ug)
1	R1	Retina	F1	DDA	T1	4	2
2	R2	Retina	F1	DDA	T1	4	2
3	R3	Retina	F1	DDA	T1	4	2
4	R1	Retina	F2	DDA	T1	6	1.8
5	R2	Retina	F2	DDA	T1	6	1.8
6	R3	Retina	F2	DDA	T1	6	1.8
7	R1	Retina	F3	DDA	T1	6	1.8
8	R2	Retina	F3	DDA	T1	6	1.8
9	R3	Retina	F3	DDA	T1	6	1.8
10	R1	Retina	F4	DDA	T1	6	1.8
11	R2	Retina	F4	DDA	T1	6	1.8
12	R3	Retina	F4	DDA	T1	6	1.2
13	R1	Retina	F5	DDA	T1	6	1.5
14	R2	Retina	F5	DDA	T1	6	1.5
15	R3	Retina	F5	DDA	T1	6	1.5
16	R1	Retina	F6	DDA	T1	6	1.2
17	R2	Retina	F6	DDA	T1	6	1.2
18	R3	Retina	F6	DDA	T1	6	1.2
25	R1	Retina	F1	DDA	T2	4	2
26	R2	Retina	F1	DDA	T2	4	2
27	R3	Retina	F1	DDA	T2	4	2
28	R1	Retina	F2	DDA	T2	6	1.8
29	R2	Retina	F2	DDA	T2	6	1.8
30	R3	Retina	F2	DDA	T2	6	1.8
31	R1	Retina	F3	DDA	T2	6	1.8
32	R2	Retina	F3	DDA	T2	6	1.8
33	R3	Retina	F3	DDA	T2	6	1.8
34	R1	Retina	F4	DDA	T2	6	1.8
35	R2	Retina	F4	DDA	T2	6	1.8
36	R3	Retina	F4	DDA	T2	6	1.2
37	R1	Retina	F5	DDA	T2	6	1.5
38	R2	Retina	F5	DDA	T2	6	1.5
39	R3	Retina	F5	DDA	T2	6	1.5
40	R1	Retina	F6	DDA	T2	6	1.2
41	R2	Retina	F6	DDA	T2	6	1.2
42	R3	Retina	F6	DDA	T2	6	1.2
49	Pool (R1-R3)	Retina	—	DDA	T1	4	2
50	Pool (R1-R3)	Retina	—	DDA	T2	4	2