Table 3. TF HIV-1 sequencing primers.
| Primer | NT sequence | Orientation | Location CH040TF (JN944905) |
|---|---|---|---|
| P1 | CTCTAGCAGTGGCGCCCGAAC | F | 627-647 |
| P2 | TTCAGCAAGCCGAGTCCTGCG | R | 710-690 |
| P3 | AGACACYATCAATGAGGAAGCTGC | F | 1394-1417 |
| P4 | TTAAAGGTACYTGAGGTCTGACTGG | R | 8990-8966 |
| P5 | CTGARAGACAGGCTAATTTTTTAGG | F | 2068-2092 |
| P6 | GAAGTTCAAYTAGGAATACCACATC | F | 2810-2834 |
| P7 | GRYCAATGGACATATCAAATWTATC | F | 3548-3572 |
| P8 | ATAAATGTCAGCTAAAAGGAGAAGC | F | 4347-4371 |
| P9 | GCCACACAATCATCACCTGCCATC | R | 5070-5047 |
| P10 | TAGTGACATAAARGTAGTGCCAAGA | F | 4987-5011 |
| P11 | TGGGTGTCRWCATAGCAGAATAGGC | F | 5776-5800 |
| P12 | ACGCCTGTGTACCCACAGACC | F | 6431-6451 |
| P13 | CAGCACAGTRCAATGYACACATGGA | F | 6933-6957 |
| P14 | GGGAGCWGCAGGAAGCACTATGG | F | 7758-7780 |
| P15 | GCAGTAGCTGARRGRACAGATAG | F | 8650-8672 |
| P16 | AGTGGGBTTYCCAGTCAGACCTC | F | 8966-8990 |