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. Author manuscript; available in PMC: 2021 Jan 28.
Published in final edited form as: J Arthroplasty. 2020 Jun 4;35(11):3343–3352. doi: 10.1016/j.arth.2020.05.070

Table 2.

Fibrotic Genes Involved in the Lung (IPF) and Hand (DD) From Our Review.

Fibrotic Pathway Lung (IPF) Hand (DD)
ECM remodeling and fibroblast regulation (cell-cell adhesion, apoptotic regulation, integrity and mechanotransduction) ACTA-2, ACTG2, ATP1A2, BRSK2 (rs71469892), CARD10, CLPTM1L (rs4449583), DES, DPP9, DSP (rs72825054, rs2744373, rs2744371, rs17133512, rs145125286, rs2008756, rs2237105), DYM, EIF1AY, MCF2L (rs1278769), MDGA2 (rs7144383), MFSD2A, MGMT, MIR4457(rs4449583), MYH11, NLGN4Y, PIGA, RNPS1, RPS4Y1, RTEL1, SCN1A, SLFNL1, SLN, SPPL2C (rs17690703), SYNPO2, TAGLN, TP53 (rs12951053, rs12602273), TPM2, VDAC3 AEN, CARD11, DAD1, DDR2, EIF3E (rs611744), EPDR1 (rs16879765), FBXL7 (rs6897647), FBXO45 (rs7426655), ITGA11, KRT15, KRT19, MAFB (rs8124695), MMP14, MMP21/22B, SAV1, TIMP2 (rs4789939), TMEM170A
Immune system dysfunction DDX3Y, HLA (rs3117116), HLA-DRB1*15, IL-10, IL-1alpha, IL-4, IL-6 (intron 4G), IL1A, IL1B (rs1143627, rs1143634, rs1143643, rs1799916), IL1RN (rs11677397, rs2637988, rs397211, rs408392), IL3, IL4, IL8 (s4073T> A, rs2227307T> G, rs2227306C > T, IL8_ht3), KDM5D, R131H (FcgRIIa), UTY CCL18, CFHR1, CFHR3, DGAT1, HCG27\\HLA-C (rs3132506, rs3130473), HCG4P6, HLA-A, HLA-DR4, HLA-DRB1*01, HLA-DRB1*15, ISG20, PRKX (rs17335275), SIRPB1, TRGC2, TRGV9
Profibrotic mediators ADAMTSL5, ALX4, CDKN1A (rs2395655, rs733590), CDKN2B, CNN1, FAM13A (rs2609260), FAM83D, FZD5, GBP4, HFE (C282Y, S65C, H63D), IFI44L, IFIT3, IGFBP5, IGFBP6, KAAG1, OAS-2, PCDH9, SLC1A2, SLC22A11, SLC39A8, SLC6A14, SLCO4C1, TF, TGF- β1, TNF-RII, TNF-α, TOLLIP(rs111521887, rs5743894, rs5743890), ZFY, ZNF385B ADAM3A, FKBP1A, HSF1, LRRC33 (rs7426656), MAP4K5, NEDD4, RSPO2 (rs611744), SDK1, SERP2, SFRP4 (rs16879765), TAB2, TGFB1, TGFbRI-3’UTR, TGFbRII-3’UTR3, TGFbRII-e5, TGFbRIII-3’UTR, WNT2 (rs4730775), WNT4 (rs7524102), WNT5A, Wnt7B (rs8140558, rs6519955), X89654, ZBTB40, ZC3H12D, Zf9–3’, Zf9–3’2, Zf9-c, ZIC1, ZIM3, ZNF160, ZNF264

DD, Dupuytren disease; ECM, extracellular matrix; IPF, idiopathic pulmonary fibrosis.