Table 3. Enrichment analysis of models.

Category	Term ID	Term description	FDR	Genes
Module 1	GO:0021612	Facial nerve structural organization	3.66E-08	NRP1, SEMA3A, SEMA3F
	GO:0021637	Trigeminal nerve structural organization	3.66E-08	NRP1, SEMA3A, SEMA3F
	GO:0021785	Branchiomotor neuron axon guidance	3.66E-08	NRP1, SEMA3A, SEMA3F
	GO:0038191	Neuropilin binding	9.71E-05	SEMA3A, SEMA3F
	hsa04360	Axon guidance	4.53E-08	EFNA3, NRP1, SEMA3A, SEMA3F
Module 2	GO:0030198	Extracellular matrix organization	0.00093	BGN, COL5A2, DDR2
	GO:0030199	Collagen fibril organization	0.0011	COL5A2, DDR2
	GO:0001503	Ossification	0.0241	COL5A2, DDR2
Module 3	GO:0019221	Cytokine-mediated signaling pathway	0.0121	FN1, VIM, ZEB1
	GO:0045664	Regulation of neuron differentiation	0.0121	FN1, VIM, ZEB1
	GO:0009888	Tissue development	0.0246	FN1, VIM, ZEB1
	GO:0010628	Positive regulation of gene expression	0.0268	FN1, VIM, ZEB1
	GO:0045666	Positive regulation of neuron differentiation	0.027	FN1, ZEB1

Abbreviations: FDR, false discovery rate; GO, gene ontology; ID, Identity document.