TABLE 1.
Characteristics and accession numbers of the genomes of 16 B. pseudomallei isolates from rivers in Laos
| Isolatea | Rivera | Latitudea | Longitudea | Raw read SRA no. | GenBank assembly accession no. | Sequence type | No. of contigs | Assembly length (Mbp) | GC content (%) | N50 (kbp) | No. of paired reads (million) | Genome coverage (×) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40S_S61 | Mekong | 15.11316 | 105.80506 | SRR11097786 | GCA_014713055.1 | ST1787 | 186 | 7.15 | 68.19 | 119.6 | 4.8 | 203 |
| 43W_S62 | Xe Bangnouan | 16.00286 | 105.47903 | SRR11097785 | GCA_014713065.1 | ST1801 | 205 | 7.17 | 68.14 | 107.1 | 4.7 | 183 |
| 43S_S63 | Xe Bangnouan | 16.00286 | 105.47903 | SRR11097778 | GCA_014713085.1 | ST1787 | 176 | 7.15 | 68.19 | 128.2 | 4.4 | 195 |
| 44W_S64 | Mekong | 16.00421 | 105.42515 | SRR11097777 | GCA_014713025.1 | ST1801 | 191 | 7.17 | 68.14 | 123.3 | 5.5 | 231 |
| 45W_S65 | Xe Banghieng | 16.09798 | 105.37699 | SRR11097776 | GCA_014713015.1 | ST1815 | 184 | 7.15 | 68.15 | 126.5 | 4.6 | 194 |
| 46W_S66 | Mekong | 17.39898 | 104.80098 | SRR11097774 | GCA_014712945.1 | ST1815 | 188 | 7.15 | 68.14 | 132.9 | 5.3 | 219 |
| 47W_S67 | Xe Bangfai | 17.07787 | 104.98503 | SRR11097775 | GCA_014712955.1 | ST1801 | 209 | 7.17 | 68.15 | 119.7 | 5.3 | 221 |
| 49W_S68 | Nam Kading | 18.32559 | 104.00002 | SRR11097773 | GCA_014712965.1 | ST1801 | 193 | 7.17 | 68.14 | 127.8 | 5.3 | 223 |
| 50W_S69 | Nam Xan | 18.39103 | 103.65572 | SRR11097772 | GCA_014712935.1 | ST1852 | 192 | 7.24 | 68.1 | 138.5 | 5.0 | 208 |
| 51W_S70 | Nam Gniep | 18.41756 | 103.60212 | SRR11097771 | GCA_014712915.1 | ST1852 | 222 | 7.25 | 68.26 | 110.8 | 4.9 | 201 |
| 52W_S71 | Nam Mang | 18.37017 | 103.19838 | SRR11097784 | GCA_014712835.1 | ST54 | 168 | 7.04 | 68.09 | 134.4 | 5 | 213 |
| 53W_S72 | Nam Ngum | 18.17874 | 103.05594 | SRR11097783 | GCA_014712895.1 | ST54 | 182 | 7.04 | 68.27 | 126.7 | 4.4 | 188 |
| 58W_S73 | Nam Ngum | 18.20194 | 102.58669 | SRR11097782 | GCA_014712875.1 | ST1852 | 184 | 7.25 | 68.1 | 120.9 | 4.7 | 195 |
| 60W_S74 | Nam Sang | 18.22297 | 102.14228 | SRR11097781 | GCA_014712825.1 | ST1852 | 186 | 7.24 | 68.11 | 123 | 4.6 | 189 |
| 64W_S75 | Mekong | 17.97309 | 102.50404 | SRR11097780 | GCA_014712815.1 | ST1869 | 212 | 7.3 | 68.1 | 97.6 | 4.8 | 197 |
| 91W_S76 | Nam Ngum | 18.3555 | 102.57198 | SRR11097779 | GCA_014712775.1 | ST1869 | 194 | 7.21 | 68.11 | 87.9 | 4.1 | 171 |
a
Data from reference 5.