Table 2.
List of specific primers for real time PCR.
Gene name | Gene full name | Forward/Reverse | T(°C) in use | T(°C) predicted | Gene ID | Gen bank no. |
---|---|---|---|---|---|---|
B2M | Beta-2-microglobulin | F:5′ ACTGAGTTCACTCCTAACG 3′ | 60 | 54.2 | 397033 | NM_213978 |
R:5′ TGCAGCATCTTCATAATCTC 3′ | 58 | |||||
18S | Ribosomal protein S18 | F:5′ CAACACCACATGAGCATATC 3′ | 60 | 59 | 396980 | NM_213940 |
R:5′ AGAAGTTCCAGCACATTTTG 3′ | 59.4 | |||||
ACAN | Aggrecan | F:5′ CACCCCATGCAATTTGAG 3′ | 60 | 62.6 | 397255 | NM_001164652 |
R:5′ AGATCATCACCACACAGTC 3′ | 55.5 | |||||
SOX9 | SRY-box 9 | F:5′ GACTGCTGAATGAGAGCGAGA 3′ | 60 | 59.87 | 396840 | NM_213843.2 |
R:5′ GAAGATGGCGTTGGGAGAGAT 3′ | 59.86 | |||||
CDH2 | Cadherin 2 | F:5′ AGGTTTGCCAGTGTGACTCC 3′ | 60 | 60.18 | 100515322 | XM_021096205.1 |
R:5′ TCTCGGCGCTTCATCCATAC 3′ | 59.97 | |||||
COL1 | Collagen type I alpha 1 chain | F:5′ TAGACATGTTCAGCTTTGTG 3′ | 60 | 56.4 | 100738123 | XM_021067153 |
R:5′ GTGGGATGTCTTCTTCTTG 3′ | 57.1 | |||||
COL2 | Collagen type II alpha 1 chain | F:5′ CGACGACATAATCTGTGAAG 3′ | 60 | 58.3 | 397323 | XM_001925959 |
R:5′ TCCTTTGGGTCCTACAATATC 3′ | 59.3 | |||||
COLX | Collagen type X alpha 1 chain | F:5′ CCAACATCCAGAATCCATC 3′ | 60 | 60.04 | 448809 | NM_001005153 |
R:5′ GTAGGTGTTTGGTATTGCTC 3′ | 59.3 | |||||
RUNX2 | Runt related transcription factor 2 | F:5′ CCAACAGAGGCATTTAAGG 3′ | 60 | 59.7 | 100155806 | XM_003482202 |
R:5′ CCAAAAGAAGTTTTGCTGAC 3′ | 59 |