Skip to main content
. 2021 Jan 27;8:1874. Originally published 2019 Nov 7. [Version 2] doi: 10.12688/f1000research.21142.2

Table 4. Real run times for Falco, fastp and FastQC on gzip compressed FASTQ format.

test Falco fastp FastQC Falco fastp FastQC
overrep off overrep off overrep off overrep on overrep on overrep on
1 1m19s 2m19s 3m49s 1m25s 6m23s 3m50s
2 45s 1m31s 2m21s 51s 5m23s 2m24s
3 33s 1m10s 1m35s 35s 2m26s 1m36s
4 1m01s 2m06s 3m01s 1m03s 3m59s 3m00s
5 16m05s 42m40s 44m57s 18m17s 53m09s 44m59s
6 12m26s 23m18s 26m39s 12m29s 47m32s 26m38s
7 8m40s 17m34s 22m31s 8m34s 44m41s 22m31s
8 7m08s 14m37s 16m06s 6m31s 18m19s 16m11s
9 2s 1s 7s 1s 27s 7s
10 2m23s 2m32s 4m01s 2m34s 5m22s 4m09s
11 22s 31s 48s 23s 1m14s 51s