Table 1. Performance of SVM and NB classifiers in MEF.
System | Category | GC corrected | Random | ||
---|---|---|---|---|---|
NB | SVM | NB | SVM | ||
MEF | All | 74.18 ± 1.08 | 96.72 ± 0.18 | 70.94 ± 0.75 | 98.06 ± 0.28 |
Sequence | 59.15 ± 0.61 | 55.44 ± 1.10 | 66.87 ± 0.88 | 64.41 ± 0.48 | |
3D shape | 55.08 ± 0.92 | 54.32 ± 0.87 | 66.23 ± 0.54 | 61.80 ± 0.97 | |
Histone marks | 84.82 ± 0.73 | 83.90 ± 0.66 | 88.61 ± 0.70 | 87.57 ± 0.74 | |
Architecture | 90.35 ± 0.61 | 94.98 ± 0.32 | 93.15 ± 0.58 | 96.52 ± 0.39 | |
Open chromatin | 81.92 ± 0.58 | 83.96 ± 1.44 | 90.48 ± 0.61 | 92.35 ± 0.63 | |
Expression | 50.36 ± 0.25 | 50.48 ± 0.54 | 50.77 ± 0.22 | 52.52 ± 1.57 | |
Pol2 | 60.60 ± 0.62 | 61.48 ± 1.06 | 57.71 ± 0.46 | 56.09 ± 0.92 | |
CpG methylation | 69.45 ± 0.88 | 73.82 ± 0.88 | 63.98 ± 0.79 | 68.90 ± 1.09 |