Table 2. Performance of SVM and NB classifiers in mouse liver.
System | Category | GC corrected | Random | ||
---|---|---|---|---|---|
NB | SVM | NB | SVM | ||
Liver | All | 76.20 ± 0.97 | 93.00 ± 0.56 | 77.43 ± 0.20 | 97.47 ± 0.13 |
Sequence | 62.95 ± 0.70 | 56.64 ± 1.10 | 74.98 ± 0.31 | 72.78 ± 0.94 | |
3D shape | 57.97 ± 0.66 | 54.00 ± 1.42 | 73.19 ± 0.38 | 69.71 ± 0.46 | |
Histone marks | 78.03 ± 0.32 | 81.17 ± 0.47 | 78.97 ± 0.44 | 85.34 ± 0.41 | |
Architecture | 87.45 ± 0.53 | 91.74 ± 0.37 | 89.50 ± 0.54 | 94.26 ± 0.56 | |
Open chromatin | 71.68 ± 0.46 | 85.32 ± 4.22 | 83.35 ± 0.92 | 92.01 ± 1.57 | |
Expression | 50.00 ± 0.01 | 50.00 ± 0.01 | 50.04 ± 0.28 | 50.02 ± 0.01 | |
Pol2 | 54.92 ± 0.24 | 53.97 ± 0.42 | 52.95 ± 0.73 | 52.63 ± 0.90 | |
CpG methylation | 71.58 ± 0.34 | 75.31 ± 0.34 | 66.56 ± 0.36 | 69.58 ± 0.44 |