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. 2021 Jan 18;118(4):e2014634118. doi: 10.1073/pnas.2014634118

Table 1.

Tiger Rattlesnake genome assembly statistics and comparisons to other snake genome assemblies

Tiger Rattlesnake Prairie Rattlesnake Five-Pace Viper King Cobra Indian Cobra
Assembly size, Gb 1.61/1.59 1.34 1.47 1.66 1.79
Number of scaffolds 4,228/160 7,043 160,256 296,399 1,897
Scaffold N50, Mb 2.11/207.72 179.89 2.12 0.23 223.35
Number of contigs 4,228 166,667 17,322 816,633 13,066
Contig N50, Mb 2.110 0.015 0.220 0.004 0.300
GC content, % 39.9/39.8 40.6 40.5
Protein-coding genes 18,240 17,352 21,194 18,506 23,248
Putative venom protein-coding genes 51 92 262 232 139

For the Tiger Rattlesnake, de novo assembly statistics are shown on the left, and RaGOO assembly statistics are shown on the right (where appropriate). The 160 RaGOO scaffolds do not include the 220 scaffolds assigned to chromosome 0 (160 RaGOO scaffolds and 220 unassigned de novo scaffolds in chromosome 0; 380 scaffolds total).