Table 1.
Tiger Rattlesnake | Prairie Rattlesnake | Five-Pace Viper | King Cobra | Indian Cobra | |
Assembly size, Gb | 1.61/1.59 | 1.34 | 1.47 | 1.66 | 1.79 |
Number of scaffolds | 4,228/160 | 7,043 | 160,256 | 296,399 | 1,897 |
Scaffold N50, Mb | 2.11/207.72 | 179.89 | 2.12 | 0.23 | 223.35 |
Number of contigs | 4,228 | 166,667 | 17,322 | 816,633 | 13,066 |
Contig N50, Mb | 2.110 | 0.015 | 0.220 | 0.004 | 0.300 |
GC content, % | 39.9/39.8 | — | — | 40.6 | 40.5 |
Protein-coding genes | 18,240 | 17,352 | 21,194 | 18,506 | 23,248 |
Putative venom protein-coding genes | 51 | 92 | 262 | 232 | 139 |
For the Tiger Rattlesnake, de novo assembly statistics are shown on the left, and RaGOO assembly statistics are shown on the right (where appropriate). The 160 RaGOO scaffolds do not include the 220 scaffolds assigned to chromosome 0 (160 RaGOO scaffolds and 220 unassigned de novo scaffolds in chromosome 0; 380 scaffolds total).