TABLE I. Drug resistance profile according to whole-genome sequencing tools for first-line anti-tuberculosis.
Genomic tools | Multidrug resistant | Other resistance | Susceptible |
TB-profiler | 18 (25.4%) | 14 (19.7%) | 39 (54.9%) |
PhyResSea | 1 (1.4%) | 25 (36.2%) | 43 (62.4%) |
KvarQ | 18 (25.4%) | 13 (18.3%) | 40 (56.3%) |
CASTBb | 15 (25%) | 34 (56.7%) | 11 (18.3%) |
RSniffer | 0 | 0 | 71 (100%) |
Mykrobe | 18 (25.4%) | 17 (23.9%) | 36 (50.7%) |
MTBSEQ | 17 (23.9%) | 23 (32.4%) | 31 (43.7%) |
a: n = 69; b: n = 60.