Software	URL
Amira	http://thermofisher.com/amira‐avizo
Arivis	https://www.arivis.com/en/imaging‐science/imaging‐science
CellProfiler	https://cellprofiler.org
ICY	http://icy.bioimageanalysis.org
ilastik	https://ilastik.org
ImageJ/Fiji	https://imagej.net
Imaris	https://imaris.oxinst.com
QuPath	https://qupath.github.io
MATLAB	https://www.mathworks.com/products/matlab.html
MetaMorph	https://www.moleculardevices.com/products/cellular‐imaging‐systems/acquisition‐and‐analysis‐software/metamorph‐microscopy
Photoshop	https://www.adobe.com/products/photoshop.html
PowerPoint	https://office.live.com/start/powerpoint.aspx
Python	https://www.python.org
R	https://www.r‐project.org
Zeiss ZEN	https://www.zeiss.com/microscopy/int/products/microscope‐software/zen/image‐analysis.html