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. 2021 Feb 1;160:105744. doi: 10.1016/j.ejps.2021.105744

Table 5.

Summary of the molecular dynamics (MD) simulation results.

Complex 1 Complex 2 Complex 3 Complex 4
Ligand ChEMBL188068 ChEMBL188068 ChEMBL398869 ChEMBL398869
Target Main protease S-protein Main protease S-protein
Average Heavy atoms RMSD (nm) 1.19 1.27 0.49 2.60
Average Number of H-Bond 1.1 1.5 2.5 0.7
Radius of gyration (Å) 22.5363 18.2784 22.5389 18.26299
Average RMSF (Å) 1.35 1.05 1.42 1.06
Binding Energy (KJ/mol) 207.31 ± 20.4 120.01 ± 22.2 206.35 ± 15.43 82.29 ± 20.6