TABLE 3.
Associations between selenium-related single nucleotide polymorphisms and changes in plasma selenium concentrations
| SNP1 | Gene | Chromosome: Position | Allele | MAF | β | SE | P |
|---|---|---|---|---|---|---|---|
| GWAS | |||||||
| rs11960388 | DMGDH | 5:78 348 209 | A/T | 0.119 | 10.030 | 4.046 | 0.01 |
| rs6887869 | DMGDH | 5:78 345 885 | C/G | 0.119 | 10.030 | 4.046 | 0.01 |
| rs17823744 | DMGDH | 5:78 344 976 | G/A | 0.121 | 9.439 | 4.047 | 0.02 |
| rs921943 | DMGDH | 5:78 316 476 | T/C | 0.286 | 5.047 | 2.745 | 0.07 |
| rs11745652 | IPO11 | 5:62 038 924 | T/C | 0.161 | −1.520 | 3.557 | 0.67 |
| rs2916143 | PITPNC1 | 17:65 504 830 | G/C | 0.137 | 2.406 | 3.901 | 0.54 |
| rs6859667 | HOMER1 | 5:78 745 042 | C/T | 0.042 | 12.610 | 6.179 | 0.04 |
| rs6586282 | CBS | 21:44 478 497 | T/C | 0.186 | −0.590 | 3.559 | 0.87 |
| Candidate gene | |||||||
| rs1050450 | GPX1 | 3:49 394 834 | A/G | 0.305 | −0.314 | 2.781 | 0.91 |
| rs3877899 | SELENOP | 5:42 801 268 | T/C | 0.236 | −3.943 | 3.124 | 0.21 |
| rs2329999 | SELENOP | 5:42 849 236 | T/G | 0.299 | −4.202 | 2.863 | 0.14 |
| rs7160073 | GPX2 | 14:65 450 630 | T/G | 0.366 | 1.741 | 2.769 | 0.53 |
Data are after 1 year of supplementation in the selenium-supplemented group (n = 428). Abbreviations: CBS, cystathionine beta-synthase; DMGDH, dimethylglycine dehydrogenase; GPX, glutathione peroxidase; GWAS, genome-wide association study; HOMER1, homer scaffold protein 1; IPO11, importin 11; MAF, minor allele frequency; PC, principal component; PITPNC1, phosphatidylinositol transfer protein cytoplasmic 1; SELENOP, selenoprotein P; SNP, single nucleotide polymorphism.
Adjusting for age at enrollment, sex, and the first 3 PCs.