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. 2021 Jan 29;100(4):e24497. doi: 10.1097/MD.0000000000024497

Table 1.

Predicted binding sites for transcription factors affected by the SNPs in Homo sapiens.

SNPs Change mode Transcription factors
g.233250963T>C (rs1816753) create TRPS1, SPDEF
abolish GLI2
g.233251039T>C (rs12476635) create AP-2
abolish BARX2, HOX, DLX
g.233251699T>G (rs2289477) create ZNF
abolish NFIB, CHURC1, HSF4

AP-2 = Integrase-type DNA-binding superfamily protein, BARX2 = BarH-like homeobox 2, CHURC1 = churchill domain containing 1, DLX = distal-less homeobox, GLI2 = GLI family zinc finger 2, HSF4 = heat shock transcription factor 4, NFIB = nuclear factor I B, SPDEF = SAM-pointed domain-containing Ets-like factor, TRPS1 = transcriptional repressor GATA binding 1, ZNF = zinc-finger.