Table 2.
Summary table of the quantitative analysis for the model quality of AML and the S.exfoliatus lipase template (PDB ID: 1JFR).
Qualitative measures | Threshold value | AML | 1JFR |
---|---|---|---|
Ramachandran plot % residues in favoured region (~98% expected) | ~98% | 98.1% | 98.4% |
Verify3D Average 3D-1D score | >80% | 97.3% | 98.5% |
ERRAT % protein below 95% limit | 95% (high resolution)91% (low resolution) | 86.7% | 94.8% |
ProSA Z-score | n/a | −6.9 | −7.3 |