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. 2021 Feb 1;22:38. doi: 10.1186/s12859-020-03952-1

Table 2.

The unified scores of DeepGRN and the top four algorithms in the DREAM Challenge

TF Cell Anchor FactorNet Cheburashka Catchitt DeepGRN
CTCF PC-3 0.67 0.17 0.83 0.5 0.33
CTCF induced pluripotent stem cell 0.83 0.33 0.67 0.5 0.17
E2F1 K562 0.5 0.83 0.67 0.17 0.33
EGR1 liver 0.17 0.83 0.67 0.33 0.5
FOXA1 liver 0.67 0.33 0.83 0.5 0.17
FOXA2 liver 0.33 0.83 0.67 0.5 0.17
GABPA liver 0.33 0.83 0.67 0.5 0.17
HNF4A liver 0.67 0.33 0.83 0.5 0.17
JUND liver 0.17 0.83 0.67 0.5 0.33
MAX liver 0.17 0.83 0.33 0.67 0.5
NANOG induced pluripotent stem cell 0.33 0.5 0.83 0.67 0.17
REST liver 0.67 0.33 0.83 0.5 0.17
TAF1 liver 0.17 0.5 0.67 0.33 0.83

Bold scores denote the TF and cell-types that DeepGRN rank as the highest