Table 1.
Comp. No. | Name | PubChem ID | Chemical structure |
Docking score against Mpro (kcal/mol) (PDB ID: 6LU7) |
Glide emodel (kcal/mol) |
---|---|---|---|---|---|
1 | Procyanidin A3 | 16129741 | −12.86 | −68.210 | |
2 | Acetoside | 5281800 | −11.974 | −61.801 | |
3 | Rutin | 5280805 | −11.187 | −95.135 | |
4 | Solanine | 262500 | −10.301 | −81.460 | |
5 | Procyanidin A4 | 53349182 | −10.005 | −66.051 | |
6 | Procyanidin B4 | 147299 | −9.940 | −60.339 | |
7 | Hypericin | 3663 | −9.560 | −85.277 | |
8 | Quercetagetin | 5281680 | −9.407 | −67.987 | |
9 | Procyanidin | 107876 | −9.209 | −62.543 | |
10 | Astragalin | 5282102 | −9.120 | −71.431 | |
11 | Procyanidin A1 | 5089889 | −9.204 | −63.702 | |
12 | Baicalin | 64982 | −8.818 | −66.079 | |
13 | Procyanidin B2 | 122738 | −8.557 | −57.315 | |
14 | Salicin | 439503 | −8.448 | −49.230 | |
15 | Theaflavin | 135403798 | −8.383 | −79.414 | |
16 | Emodin-8-glucoside | 99649 | −8.211 | −67.011 | |
17 | Hinokiflavone | 5281627 | −8.130 | −87.255 | |
18 | Quercitrin | 5280459 | −8.121 | −43.916 | |
19 | Procyanidin C2 | 11182062 | −8.107 | −63.103 | |
20 | Indican | 441564 | −8.084 | −40.609 | |
21 | Chebulic acid | 71308174 | −8.077 | −72.474 | |
22 | Amentoflavone | 5281600 | −7.981 | −54.006 | |
23 | (-)-Catechin gallate | 6419835 | −7.956 | −85.457 | |
24 | Fisetin | 5281614 | −7.940 | −53.530 | |
25 | Procyanidin C1 | 169853 | −7.814 | −58.015 | |
26 | (-)-Epicatechin gallate | 107905 | −7.857 | −88.167 | |
27 | Morin | 5281670 | −7.631 | 53.217 | |
28 | Garcinol | 174159 | −7.551 | −60.652 | |
29 | Glycyrrhizic acid | 14982 | −7.549 | −69.351 | |
30 | Sweroside | 161036 | −7.547 | −36.098 | |
31 | Wikstromol | 99938 | −7.547 | −64.848 | |
32 | Baicalein | 5281605 | −7.463 | −52.709 | |
33 | Myricetin | 5281672 | −7.311 | −60.412 | |
34 | Kaempferol | 5280863 | −7.307 | −54.359 | |
35 | Procyanidin A2 | 124025 | −7.302 | −59.071 | |
36 | Calystegine C1 | 385737 | −7.234 | −46.486 | |
37 | Chrysin | 5281607 | −7.162 | −48.230 | |
38 | Genistein | 5280961 | −7.138 | −52.315 | |
39 | Arbutin | 440936 | −7.137 | −43.350 | |
40 | Apigenin | 5280443 | −7.090 | −52.242 | |
41 | Curcumin | 969516 | −7.077 | −62.444 | |
42 | Luteoline | 5280445 | −7.071 | −56.330 | |
43 | Robinetin | 5281692 | −7.057 | −60.290 | |
44 | Theaflavin-3,3′-digallate | 135403795 | −7.010 | −117.336 | |
45 | Ipolamiide | 442425 | −6.996 | −45.556 | |
46 | (-)-Gallocatechin gallate | 199472 | −6.847 | −86.726 | |
47 | (-)-Catechin | 73160 | −6.709 | −51.988 | |
48 | Mangiferin | 5281647 | −6.651 | −63.973 | |
49 | Rhamnetin | 5281691 | −6.578 | −55.659 | |
50 | Cyanidin | 128861 | −6.535 | −63.976 | |
51 | Epitheaflavin monogallate | 135625500 | −6.505 | −109.923 | |
52 | Cordifoliside A | 101676711 | −6.428 | −71.467 | |
53 | Ellagic acid | 5281855 | −6.393 | −48.814 | |
54 | Calanolide | 1201 | −6.391 | −50.372 | |
55 | Morelloflavone | 5464454 | −6.300 | −72.764 | |
56 | Aloe emodin | 10207 | −6.229 | −46.278 | |
57 | Scutellarin | 185617 | −6.137 | −69.299 | |
58 | Cordifoliside C | 101676208 | −6.123 | −59.081 | |
59 | Cordifoliside B | 101676207 | −5.965 | −58.814 | |
60 | N3 (Co-crystal ligand) | - | −7.93 | −118.489 |
Bold values show the top docking scores.