Table 1. MUSICO parameters for the simulations of twitch contractions in intact rat trabeculae at fixed length and at temperature 27.2°C in Fig. 5 (Caremani et al., 2016) and at 27.5°C in Fig. 6 (Janssen et al., 2002).
Description | Parameter | Isometric trabeculae | Notes |
---|---|---|---|
Cross-bridge cycle | |||
Myosin–actin binding rate | 226 s−1 | ||
Myosin–actin detachment ratea | 46 s−1 | ||
Myosin stroke cap rate | 1,000 s−1 | Mijailovich et al., 2016, 2019 | |
Myosin reverse stroke cap rate | 100 s−1 | Mijailovich et al., 2016, 2019 | |
Power stroke Gibbs energy change | −13 | Mijailovich et al., 2016, 2019 | |
Working stroke | 10.5 nm | Duke, 1999; Mijailovich et al., 2016, 2019 | |
Second working stroke | 1 nm | Mijailovich et al., 2016, 2019 | |
ADP release ratea | 60 s−1 | ||
ATP binding and myosin detachmenta | 106 s−1 | ||
Hydrolysis forward ratea | 100 s−1 | ||
Hydrolysis backward ratea | 10 s−1 | ||
Cross-bridge stiffness | 1.3 pN/nm | Duke, 1999; Mijailovich et al., 2016, 2019 | |
at 27.5°C | 4.147 pN·nm | ||
Calcium kinetics | |||
Calcium binding to TnC equilibrium rate | 1 µM−1 | Smith and Geeves, 2003; Geeves et al., 2011 | |
Calcium binding rate to TnC | 75.4 µM−1·s−1 | Smith and Geeves, 2003; Geeves et al., 2011 | |
Calcium dissociation rate from TnC | 75.4 s−1 | Kreutziger et al., 2011; Wang et al., 2012, 2013 | |
TnI–actin equilibrium rate constant At high Ca2+ | 10 | ||
TnI–actin backward rate constant | 375 s−1 | ||
Allosteric TnC–TnI–actin–Ca2+ parameter | 0.01 | Smith and Geeves, 2003; Geeves et al., 2011 | |
CFC | |||
Tpm pinning angle | −25° | Poole et al., 2006 | |
Myosin Tm angular displacements | 10° | Poole et al., 2006 | |
Angular SD of free CFC | 29.7° | Pirani et al., 2005; Mijailovich et al., 2012 | |
Persistence length of Tm–Tn confined chain | 50 nm | Mijailovich et al., 2012 | |
PS | |||
Transition rate to PS | 200 s−1 | Assumed | |
Baseline rate | 5 s−1 | Assumed | |
Amplitude | 400 s−1 | Assumed | |
Calcium Hill function slope | 5 | Assumed | |
Half-activation point of the Hill function | 1 µM | Assumed | |
Sarcomere | |||
Length of sarcomere | 2.2 µm | ||
Length of actin filament | 1.1 µm | Robinson and Winegrad, 1977, 1979 | |
Interfilament spacing | 33.83 nm | Irving and Maughan, 2000 | |
Thin-filament elastic modulus | 65 nN | Huxley et al., 1994; Kojima et al., 1994 | |
Thick-filament elastic modulus | 132 nN | Huxley et al. 1994 |
Based on mouse and human α myosin values in (Deacon et al., 2012a, 2012b) with corrections for temperature; ionic strength is as documented in (Mijailovich et al., 2017).