Table 1.
Bacterial isolates used in co-culture experiments with M. vaginatus PCC9802.
Isolate information | Match to known cyanosphere members (% similarity to 16S rRNA gene) | ||||||
---|---|---|---|---|---|---|---|
Origin | Strain ID | Taxonomic assignment | Growth on N-free medium | nifH gene detected by PCR | Functional inference | Reference | |
Cyanosphere associated | O80 | Arthrobacter sp. | + | + | Aerobic/saprophytic | [64] | 99% (this work) |
METH4 | Massilia sp. | + | − | Aerobic/copiotrophic | [62, 65] | 98% (this work) | |
O64 | Bacillus sp. | + | + | Strict or facultative aerobe/copiotroph | [63, 67] | 98% [29] | |
Biocrust associated | S1 | Ensifer sp. | + | − | Aerobic, rhizobacteria | [68] | No match |
S14 | Paenibacillus sp. | + | + | Copiotrophic, rhizobacteria | [63, 66] | No match | |
B17 | Geodermatophilus sp. | + | − | Aerobic, rhizobacteria | [67] | No match | |
METH2 | Streptomyces sp. | + | + | Aerobic/saprophytic | [63, 70] | No match | |
Non-biocrust associated | K12 | Escherichia coli | − | − | Copiotrophic | [71] | No match |
D1 | Serratia marcescens | − | − | Copiotrophic | [63, 71] | No match |
Taxonomic assignment and functional inference based on BLAST of 16S rRNA gene sequence against the NCBI database. Cyanosphere match indicates isolate 16S rRNA sequence similarity to cyanosphere members detected with culture independent approaches here or elsewhere.