Table 2.
Primer pairs used to amplify the ancient mtDNA control-region sequence
Fragment name | Primer name | Primer sequences (5′-3′) | Size (bp) | Reference |
---|---|---|---|---|
Fragment 1 | Mm-1F | GCACCCAAAGCTGGTATTCT | 146 | [25] |
Mm-1R | TTTTATGACCTGAACCATTGATT | Modified from [25] | ||
Fragment 2 | Mm-2F | CCAAGCATATAAGCAAGTACAT | 141 | [25] |
Mm-2R | GTATGTCAGATAACACAGATAT | Modified from [25] | ||
Fragment 2a | Mm-2aF | CAATATATATACCATGAATATTATCTTAA | 121 | This study |
Mm-2aR | AAGGGGATAGTCATATGG | This study | ||
Fragment 2b | Mm-2bF | ATCTGTGTTATCTGACATACACC | 150 | This study |
Mm-2bR | TTTAATGGGCCCGGAGCGAGAA | This study | ||
Fragment 2c | Mm-2cF | ACTATCCCCTTCCCCATTTGG | 143 | This study |
Mm-2cR | GTAAGAACCAGATGTCTGATAA | This study | ||
Fragment 3 | Mm-3F | TCTACCATCCTCCGTGAAA | 145 | Modified from [25] |
Mm-3R | TATGGGCGATAACGCATTTGAT | [25] | ||
Fragment 4 | Mm-4F | CTTTATCAGACATCTGGTTCTT | 124 | [25] |
Mm-4R | CACAGTTATGTTGGTCATGG | This study | ||
Fragment 4b | Mm-4bF | CTTAAATAAGACATCTCGATGG | 142 | This study |
Mm-4bR | TAGACTGTGTGCTGTCCTT | This study | ||
Fragment 5 | Mm-5F | CTTTCATCAACATAGCCGTCAA | 129 | [25] |
Mm-5R | CATTTATGTCTAACAAGCATGAA | This study | ||
Fragment 6 | Mm-6F | CACCTACGGTGAAGAATCATT | 146 | [25] |
Mm-6R | TGTTTTTGGGGTTTGGCATTAA | [25] | ||
Fragment 7 | Mm-7F | CTCAATACCAAATTTTAACTCTC | 144 | [25] |
Mm-7R | GTCATATTTTGGGAACTACTAG | [25] | ||
Fragment 8 | Mm-8F | CTATCAAACCCTATGTCCTGA | 140 | [25] |
Mm-8R | CTTGTTAATGTTTATTGCGTAA | Modified from [25] |