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. 2020 Oct 16;72(2):302–319. doi: 10.1093/jxb/eraa469

Table 1.

Statistics associated with the assembly of the Brachiaria ruziziensis reference genome and anchoring in pseudo-molecules

Whole-genome assembly (WGA) Pruned WGAa Anchored assembly
Total length 732.5 Mbp 533.9 Mbp 525.1 Mbp
% Ns 10.6% 11.7% 12.18%
Number of sequences 102 579 23 076 9 pseudo-Chrs
N50 27.8 kbp 44.6 kbp 55.9 Mbp
N20 76.1 kbp 91.7 kbp 62.7 Mbp
N80 3.9 kbp 19.5 kbp 44.1 Mbp

The WGA is deposited in NCBI, accession number GCA_003016355. Anchoring is available in AGP format, together with the raw reads, in the Bioproject PRJNA437375.

Ns, ambiguous nucleotides; N50, N20, and N80, sequence length of the shortest contig at 50, 20, and 80% of the total genome length.

aSequences without genes and under 10 kbp have been removed.