Table 4. Extraction Buffer (EB) composition.
Component | Volume added | Final concentration | |
---|---|---|---|
HPLC grade acetonitrile | 5771.25 μl | 71.25% | |
HPLC grade methanol | 1923.75 μl | 23.75% | |
HPLC grade formic acid | 15.39 μl | 1.9% | |
~15 mg of isotopically labeled yeast extract (ISO1) dissolved in 1.5 ml of HPLC grade water. Note: After adding water to the yeast extract, dissolve the yeast extract by vortexing and/or rocking the yeast extract and water at 4 °C for approximately 30 min. Solution can be stored at -80 °C although some metabolites will degrade over time (see manufacturer’s instructions). |
405 μl | 5% | |
2 mM solution of 2H9 choline prepared in HPLC grade water (stored at -20 °C) | 4.03 μl | 1 μM | |
50 mM solution of 13C4 3-hydroxybutyrate prepared in HPLC grade water (stored at -20 °C) | 0.81 μl | 5 μM | |
200 μM solution of 13C6 15N2 cystine prepared in HPLC grade water (stored at -20 °C) | 81 μl | 2 μM | |
100 mM solution of 13C3 lactate prepared in HPLC grade water (stored at -20 °C) | 16.2 μl | 200 μM | |
57.3 mM solution of 13C6 glucose prepared in HPLC grade water (stored at -20 °C) | 7.05 μl | 50 μM | |
100 mM solution of 13C3 serine prepared in HPLC grade water (stored at -20 °C) | 1.62 μl | 20 μM | |
750 mM solution of 13C2 glycine prepared in HPLC grade water (stored at -20 °C) | 1.62 μl | 150 μM | |
2 mM solution of 13C5 hypoxanthine prepared in HPLC grade water (stored at -20 °C) | 2.02 μl | 0.5 μM | |
200 mM solution of 13C2 15N taurine prepared in HPLC grade water (stored at -20 °C) | 2.02 μl | 50 μM | |
60 mM solution of 13C3 glycerol prepared in HPLC grade water (stored at -20 °C) | 2.02 μl | 15 μM | |
4 mM solution of 2H3 creatinine prepared in HPLC grade water (stored at -20 °C) | 2.02 μl | 1 μM |