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. 2019 Nov 20;9(22):e3427. doi: 10.21769/BioProtoc.3427

Table 4. Extraction Buffer (EB) composition.

Component Volume added Final concentration
HPLC grade acetonitrile 5771.25 μl 71.25%
HPLC grade methanol 1923.75 μl 23.75%
HPLC grade formic acid 15.39 μl 1.9%

~15 mg of isotopically labeled yeast extract (ISO1) dissolved in 1.5 ml of HPLC grade water.

Note: After adding water to the yeast extract, dissolve the yeast extract by vortexing and/or rocking the yeast extract and water at 4 °C for approximately 30 min. Solution can be stored at -80 °C although some metabolites will degrade over time (see manufacturer’s instructions).

405 μl 5%
2 mM solution of 2H9 choline prepared in HPLC grade water (stored at -20 °C) 4.03 μl 1 μM
50 mM solution of 13C4 3-hydroxybutyrate prepared in HPLC grade water (stored at -20 °C) 0.81 μl 5 μM
200 μM solution of 13C6 15N2 cystine prepared in HPLC grade water (stored at -20 °C) 81 μl 2 μM
100 mM solution of 13C3 lactate prepared in HPLC grade water (stored at -20 °C) 16.2 μl 200 μM
57.3 mM solution of 13C6 glucose prepared in HPLC grade water (stored at -20 °C) 7.05 μl 50 μM
100 mM solution of 13C3 serine prepared in HPLC grade water (stored at -20 °C) 1.62 μl 20 μM
750 mM solution of 13C2 glycine prepared in HPLC grade water (stored at -20 °C) 1.62 μl 150 μM
2 mM solution of 13C5 hypoxanthine prepared in HPLC grade water (stored at -20 °C) 2.02 μl 0.5 μM
200 mM solution of 13C2 15N taurine prepared in HPLC grade water (stored at -20 °C) 2.02 μl 50 μM
60 mM solution of 13C3 glycerol prepared in HPLC grade water (stored at -20 °C) 2.02 μl 15 μM
4 mM solution of 2H3 creatinine prepared in HPLC grade water (stored at -20 °C) 2.02 μl 1 μM