Table 2.
ID | NCCM Pattern | CHD | Gene | Variant | Zygosity | Parental origin | Pathogenicity |
---|---|---|---|---|---|---|---|
PATHOGENIC/LIKELY PATHOGENIC VARIANTS | |||||||
2 | BV | EA; PS; VSD | NONO | NM_001145408.1: c.246_249del, p.P83fs7* | Hemizygous | Maternal | Pathogenic |
3 | LV | PA; VSD; PLSVC; RAAWMIB; RDA | NONO | NM_001145408.1: c.246_249del, p.P83fs7* | Hemizygous | Maternal | Pathogenic |
4 | LV | PS; VSD; RVD; PLSVC | NONO | NM_001145408.1: c.246_249del, p.P83fs7* | Hemizygous | Maternal | Pathogenic |
6 | LV | EA; ASD; PS; ABPOTAA | NONO | NM_001145408.1: c.471del, p.Q157fs18* | Hemizygous | Maternal | Pathogenic |
9 | BV | NA | PRKAG2 | NM_016203.3: c.G1592A, p.R531Q | Heterozygous | De novo | Pathogenic |
10 | BV | PS | KCNH2 | NM_000238.4: c.A1847G, p.Y616C | Heterozygous | De novo | Pathogenic |
17 | BV | EA; PS; VSD | NONO | NM_001145408.1: c.471del, p.Q157fs18* | Hemizygous | Maternal | Pathogenic |
36 | LV | NA | TPM1 | NM_001018005.2: c.G398A, p.R133Q | Heterozygous | De novo | Likely pathogenic |
ID | NCCM | CHD | Copy Number Variant | Size (Mbp) | Parental Origin | Pathogenicity | |
PATHOGENIC/LIKELY PATHOGENIC COPY NUMBER VARIANTS | |||||||
13 | LV | VSD | seq[hg19]del(1)(q42.3q44) | 12.952 | De novo | Pathogenic | |
chr1:g.236262500_249214999del* |
ABPOTAA, abnormal branching pattern of the aortic arch; BV, biventricle; CHD, congenital heart defect; EA, Ebstein's anomaly; LV, left ventricle; NCCM, noncompaction cardiomyopathy; PA, Pulmonary atresia; PLSVC, Persistent left superior vena cava; PS, Pulmonic stenosis; RAAWMIB, Right aortic arch with mirror image branching; RDA, Right ductus arteriosus; RVD, Right ventricular diverticulum; VSD, ventricular septal defect.
, This CNV contains 116 genes, among which fourteen genes FH, MTR, HNRNPU, AKT3, RYR2, EDARADD, ZBTB18, GREM2, COX20, CHRM3, NLRP3, FMN2, ACTN2, and SDCCAG8 are associated with diseases in OMIM database. RYR2 gene is known to be associated with cardiomyopathy (arrhythmogenic right ventricular dysplasia-2).