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. Author manuscript; available in PMC: 2021 May 9.
Published in final edited form as: Nat Struct Mol Biol. 2020 Nov 9;28(1):50–61. doi: 10.1038/s41594-020-00522-0

Extended Data Fig. 1. Activation loop mutagenesis of Mec1.

Extended Data Fig. 1

(a) Representative complete gel of Mec1 kinase assay, described in Fig. 2. The gel shown is for the experiment in Fig. 2a, WT.

(b) Kinase activity of Mec1 and Mec1(F2244L) as a function of Dna2(1-499). Phosphorylation rates are given below the gel.

(c) Kinase activity of Mec1 and Mec1(F2244L) as a function of Dna2-1 peptide: HHDFTQDEDGPMEEVIWKYSPLQRDMSDKT. Fold stimulation compared to wild-type Mec1 without activator is given.

(d) Phylogenetic analysis of the activation loop 2243DFD2245 motif. 640 eukaryotic Mec1/ATR sequences were aligned with MSAProbs (https://toolkit.tuebingen.mpg.de/), filtered to a set of 95 sequences that showed less than 50% sequence identity, and the motif distribution recorded.

(e) Titration of Rad53 into the Mec1 assay. Standard assays with 3 nM Mec1 and 5 nM Dna2(1-499) activator, or with 3 nM Mec1(F2244L) with or without 5 nM Dna2(1-499) activator were carried out at increasing concentrations of GST-Rad53-kd. Activities are expressed as Rad53 phosphates per Mec1 (monomer) per minute, and the data were modeled to the Michaelis-Menten equation.

(f) Ponceau staining of the extracts used for the Western blots in Fig. 2e.