Table 3.
LINC00483 dysregulation in several expression datasets.
| Dataset | Class | Expression | P-value |
|---|---|---|---|
| GSE3629 (121) | Class: colorectal cancer vs. non-neoplastic rectal mucosa | Down in tumor | 1.50E−19 |
| GSE3629 (121) | Group: sporadic ca vs. uc-nonca | Down in sporadic ca | 1.50E−17 |
| GSE21510 (148) | Tissue: cancer-lcm vs. normal-homogenized | Down in cancer | 5.80E−16 |
| GSE8671 (64) | Tissue: adenoma vs. normal | Down in adenoma | 4.70E−10 |
| GSE20916 (145) | Tissue: adenocarcinoma vs. normal_colon | Down in adenocarcinoma | 1.20E−09 |
| GSE3629 (121) | Group: sporadic ca vs. uc-ca | Down in sporadic ca | 1.50E−09 |
| GSE76124 (198) | tumor_grade: poorly_differentiated vs. well_differentiated | Down in poorly differentiated | 5.70E−08 |
| GSE20916 (145) | Malignancy: carcinoma vs distant_normal_colon | Down in carcinoma | 4.50E−07 |
| GSE8671 (64) | nt_size: 0.2_cm_(x3) vs. 2.0_cm | Down in 2 cm | 4.60E−07 |
| GSE35896 (62) | braf_mutation: n vs. y | Down in y | 5.30E−07 |
| GSE8671 (64) | nt_size: 0.2_cm_(x3) vs. 1.5_cm | Down 1.5 cm | 8.60E−07 |
| GSE2109 (315) | nt_pathological_grade: 2 vs. 3 | Down in 3 | 3.10E−06 |
| GSE39582 (566) | cimp_status: neg vs. pos | Down in pos | 3.30E−06 |
| GSE35896 (62) | braf_mutation: n vs. y | Down in y | 7.50E−06 |
| GSE20916 (145) | Tissue: carcinoma vs. normal_colon | Down in carcinoma | 1.90E−05 |
| GSE6791 (84) | sample_source: cervical normal vs.c head and neck cancer | Down in cancer | 1.90E−05 |
| GSE6791 (84) | Type: cervical normal vs. head and neck cancer | Down in cancer | 1.90E−05 |
| GSE4554 (84) | ms_status: msi vs. mss | Down in msi | 2.00E−05 |
| GSE8671 (64) | nt_location_tissue: sigmoid_colon_adenoma vs. sigmoid_colon_normal | Down in adenoma | 2.60E−05 |
| GSE76124 (198) | tumor_grade: moderately_differentiated vs. well_differentiated | Down in moderately differentiated | 3.80E−05 |
| GSE23878 (59) | Group: colon tumor vs. normal paired tissue | Down in colon tumor | 4.70E−05 |
| GSE29271 (210) | survival_time_(months): 35 vs. 9 | Down in 35 | 5.60E−05 |
| GSE20916 (145) | Malignancy: adenoma vs. carcinoma | Down in adenoma | 6.10E−05 |
| GSE13294 (155) | microsatellite_status: msi vs. mss | Down in msi | 1.20E−04 |
| GSE8671 (64) | nt_location_tissue: descending_colon_adenoma vs. rectum_normal | Down in adenoma | 5.30E−04 |
| GSE8671 (64) | nt_location_tissue: descending_colon_adenoma vs. descending_colon_normal | Down in adenoma | 5.40E−04 |
| GSE20916 (145) | Tissue: colon_tumor vs. norma_colon | Down in tumor | 6.10E−04 |
| GSE3629 (121) | Group: uc-associated ca vs. uc-nonca | Down in ca | 6.90E−04 |
| GSE41258 (390) | Tissue: normal colon vs. polyp | Down in polyp | 2.20E−03 |
| GSE17538 (232) | ajcc_stage: 2 vs. 4 | Down in 2 | 4.20E−03 |
| GSE35896 (62) | pten_mutation: n vs. y | Down in y | 4.20E−03 |
| GSE29271 (210) | survival_time_(months): 36 vs. 6 | Down in 36 | 4.60E−03 |
| GSE42363 (14) | tumor_grade: moderately vs. poorly | Down in poorly diffentiated | 5.20E−03 |
| GSE4183 (53) | Group: colon_adenoma vs. healthy_control | Down in adenoma | 5.20E−03 |
| GSE35896 (62) | pten_mutation: n vs. y | Down in y | 5.40E−03 |
| GSE50948 (156) | invasive_tumor_area_size: 15 vs. 6 | Down in 15 | 5.80E−03 |
| GSE33114 (108) | sample_descr: normal colon mucosa vs primary tumor resection | Down in tumor | 8.30E−03 |
| GSE33114 (108) | sample_source: normal colon mucosa vs. primary tumor resection | Down in tumor | 8.30E−03 |
| GSE33114 (108) | Type: normal vs. tumor | Down in tumor | 8.30E−03 |
| GSE21510 (148) | Tissue: cancer-homogenized vs. normal-homogenized | Down in cancer | 8.30E−03 |
| GSE4107 (22) | Tissue: mucosa_control vs. mucosa_patient | Down in patients | 8.60E−03 |
| GSE9891 (285) | Stagecode: ia vs. iii | Down in ia | 9.50E−03 |
| GSE35896 (62) | kras_mutation: n vs. y | Down in no | 9.60E−03 |
| GSE17538 (232) | ajcc_stage: 1 vs. 2 | Down in 2 | 9.70E−03 |
In this table are reported 1) GEO ID (the sample number is shown in brackets); 2) class of comparison; 3) LINC00483 expression; 4) p-values of ANOVA test for each dataset.