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. 2021 Feb 2;6(1):e00933-20. doi: 10.1128/mSystems.00933-20

TABLE 1.

Known heme uptake, regulatory, and synthesis proteins in P. aeruginosa

Gene Locus no.a Enzyme or function No. of Tn inserts in original library Reference(s)
Uptake
    hxuA PA1302 Heme outer membrane receptor 148
    hxuR PA1301 Anti-sigma factor 70, 148
    hxuI PA1300 ECF sigma factor 70, 148
    hasD PA3406 Transport protein 149
    hasA PA3407 Extracellular heme binding (hemophore) 149
    hasR PA3408 Heme outer membrane receptor (sensing) 1 149
    hasE PA3405 Membrane fusion protein 149
    hasF PA3404 Outer membrane protein 149
    hasS PA3409 Anti-sigma factor 149
    hasI PA4310 ECF sigma factor 149
    phuR PA4710 Major heme outer membrane receptor 5 149
    phuU PA4707 Inner membrane heme transporter 1 149
    phuV PA4706 Inner membrane heme transporter 1 149
    phuW PA4705 Possible PhuR auxiliary protein 149
    phuS PA4709 Heme trafficking 1 149
    phuT PA4708 Heme trafficking 149
Catabolism
    hemO PA0672 Major heme oxygenase 1 10
    bphO PA4116 Phytochrome heme oxygenase 1 150
Regulation
    dnr PA0527 NO responsive transcription factor 1 56
    anr PA1544 O2 responsive transcription factor 56
    prrF1/2 NAb Iron responsive sRNA 35
Synthesis (of HemB)
    gltX PA3134 Glutamyl-tRNA synthetase 151
    hemA ALA synthase NA 1
    hemA PA4666 Glu-tRNA reductase 152
    hemL1 PA3977 Glutamate-1-semialdehyde 2,1-aminomutase 1
    hemL2 PA4088 Glutamate-1-semialdehyde 2,1-aminomutase 1
    hemL3 PA5523 Glutamate-1-semialdehyde 2,1-aminomutase 2, 1c 1
    hemB PA5243 PBG synthase 1
    hemC PA5260 HMB synthase 1
    hemD PA5259 URO synthase 1
    hemE PA5034 URO decarboxylase 1
    hemF PA0024 Coproporphyrinogen decarboxylase 1 1
    hemN/Z PA1546 O2-independent coproporphyrinogen III oxidase 2 1
    hemG Protoporphyrinogen dehydrogenase NA 1
    hemJd PA0661 Protoporphyrinogen dehydrogenase 1 1
    hemK PA4664 Methyltransferase 1 1
    hemY PA5257 Protoporphyrinogen oxygenase 153
    hemH PA4655 Protoporphyrin ferrochelatase 1
    hemX PA5258 Membrane heme biosynthesis regulatory protein 153
HemD1 synthesis
    nirF PA0516 HemD1 biosynthesis 2 154
    nirL PA0514 HemD1 biosynthesis 154
    nirJ PA0511 HemD1 biosynthesis 1 154
    nirE PA0510 Uroporphyrin III c-methyltransferase 1 154
Siroheme
    cysG PA2611 Siroheme synthase 155
    cobA PA1778 Uroporphyrin III methyltransferase 1 155
Colbamin (B12)
    cobI PA2904 Cobalt-factor-2 C20-methyltransferase 156
    cobG PA2906 Precorrin-3B synthase 1 156
    cobJ PA2903 Precorrin-3B C17-methyltransferase 156
    cobM PA2948 Cobalt-precorrin-4 C11-methyltransferase 156
    cobF Precorrin-6A synthase NA 156
    cobK PA2909 Cobalt-precorrin-6A reductase 1 156
    cobH PA2905 Cobalt-precorrin-8 methylmutase 156
    cobB PA1273 c-Diamide synthase 156
    cobN1 PA2944 Cobaltochelatase 3 156
    cobN2 PA1923 Cobaltochelatase 156
    cobO PA1272 Cob(I)alamin adenosyltransferase 1c 156
    cobQ PA1277 Adenosylcobyric acid synthase 156
    cobC PA1276 Threonine-phosphate decarboxylase 156
    cobD PA1275 Adenosylcobinamide-phosphate synthase 156
    cobP PA1278 Adenosylcobinamide kinase 156
    cobV PA1281 Adenosylcobinamide-GDP ribazoletransferase 156
    Hypothetical PA1280 Alpha-ribazole phosphatase 156
    cobU PA1279 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 1 156
    cobL PA2907 Precorrin-6Y C5,15-methyltransferase 156
a

Locus for PAO1 strain.

b

NA, not applicable.

c

Tn insertion disrupts predicted promoter.

d

Homology by sequence only.