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. 2021 Jan 21;11:599605. doi: 10.3389/fmicb.2020.599605

Table 1.

Primer sequences and PCR conditions used for the detection of aflatoxigenic Aspergillus isolated from dairy feeds.

Prime pair Target gene Primer sequence (5' → 3') PCR conditions Reference
1 2 3 4 5 6 Product size (bp)
Nor-1F
Nor-1R
aflD ACCGCTACGCCGGCACTCTCGGCAC
GTTGGCCGCCAGCTTCGACACTCCG
94°C:10 min 94°C:1 min 65°C:1 min 72°C:2 min 33 72°C:min s 400
Ver-1F
Ver-1R
aflM GCCGCAGGCCGCGGAGAAAGTGGT
GGGGATATACTCCCGCGACACAGCC
95°C:4 min 95°C:1 min 58°C:1 min 72°C:30s 30 72°C:10 min 600 Rashid et al., 2008; Abd El-Aziz et al., 2015
Omt-1F
Omt-1R
aflP GTGGACGGACCTAGTCCGACATCAC
GTCGGCGCCACGCACTGGGTTGGGG
94°C:5 min 94°C:1 min 75°C:2 min 72°C:2 min 33 72°C:10 min 797
aflR-1F aflR TATCTCCCCCCGGGCATCTCCCGG
GTCGGCGCCACGCACTGGGTTGGGG
95°C:4 min 94°C:1 min 60°C:1 min 72°C:30s 30 72°C:10 min 1,000
aflR-1R
AflS-1F
AflS-2R
aflS TGAATCCGTACCCTTTGAGG
GGAATGGGATGGAGATGAGA
95°C:10 min 95°C:50s 58°C:50s 72°C:2 min 30 72°C:5 min 684 Gallo et al., 2012; Fakruddin et al., 2015

1, Pre-dwelling; 2, Denaturation; 3, Annealing; 4, Extension; 5, Cycles; 6, Post-dwelling.