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. 2021 Feb 4;17(2):e1009244. doi: 10.1371/journal.ppat.1009244

Fig 6. The taxonomic distribution of 1,189 predicted TcC proteins.

Fig 6

Maximum-likelihood tree of 1,189 predicted set of TcA proteins (root on midpoint), based on the concatenated multiple alignment sequences of the three known domains, including VRP1 (PF03538), Neuraminidase (PF18413) and TcA_TcB_BD (PF18276). The tree was constructed by FastTree under WAG models with gamma optimization. TcA proteins encoding the RBD-D domain (PF18518) were indicated by solid red circles at the leaf. Outside strips were color coded by bacterial families as indicated by the key. Outer triangles represent the genetic organization of each TcA set. The five distinct types of TcA group are highlighted with colored shadows for clarity. The tree scale represents substitutions per site. A detailed rectangular tree is given in S7 Fig.