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. 2020 Dec 3;9:Chem Inf Sci-1390. [Version 1] doi: 10.12688/f1000research.27141.1

Table 2. OpenFF-1.2 force field parameters identified to be overrepresented in high TFD molecules.

These parameters show statistically significant differences (p < 0.05) in representation ratios of the high TFD molecules compared to ratios of the full molecule set. Refinement of these parameters may address conformational differences in MM-optimized molecular geometries compared to QM-optimized geometries.

Angles Bonds Improper
dihedrals
Van der
Waals
Proper
dihedrals
a1 b1 i3 n2 t1
a2 b2 n3 t2
a7 b3 n16 t3
a8 b7 n20 t4
a9 b9 t17
a17 b10 t18
a18 b83 t20
a19 t22
t23
t51
t52
t59
t61
t62
t68