| APC/C | Anaphase-promoting complex/cyclosome |
| bHLH | basic Helix-loop-helix |
| Cul7 | Culin 7 |
| EC | Embryonal carcinoma |
| ENK | Early embryo specific NK |
| EpiSCs | Epiblast stem cells |
| ESCs | Embryonic stem cells |
| Fbxw8 | F-box and WD40 domain-containing protein 8 |
| HECT | Homologous to E6-AP COOH terminus |
| HERC | HECT and regulator of RCC1-like domains-containing |
| HMG | High-mobility-group |
| ICM | Inner cell mass |
| iPSCs | induced Pluripotent Stem cells |
| Klfs | Krüppel-like factors |
| March5 | Membrane-associated ring finger (C3HC4) 5 |
| MBs | Myc boxes |
| MS | Mass spectrometry |
| Nedd4 | Neuronal precursor cell-expressed developmentally downregulated 4 |
| OCT4 | Octamer-binding transcription factor-4 |
| PGCs | Primordial germ cells |
| PHD/LAP | Plant homeodomain/leukemia-associated protein |
| PKA | Protein kinase A |
| POU | Pit-Oct-Unc |
| POUh | POU homeodomain |
| POUs | POU-specific domain |
| Prkar1a | Protein kinase type I-alpha |
| RA | Retinoid acid |
| RBPs | RNA-binding proteins |
| RBR | RING between RING |
| Rbx1 | RING box protein-1 |
| RCC1 | Regulator of chromosome condensation 1 |
| RING | Really Interesting New Gene |
| RLD | RCC1-like domains |
| RNF20 | Ring Finger Protein 20 |
| RNF40 | Ring Finger Protein 40 |
| ROS | Reactive oxygen species |
| Rpb1 | RNA polymerase II subunit B1 |
| SCF | Skp1/Cul1/F-box |
| shRNA | short-hairpin RNA |
| Sox2 | SRY-related HMG Box 2 |
| SRY | Sex-determining region Y |
| TFs | Transcription factors |
| TRIM32 | Tripartite motif containing 32 |
| Uba/E1 | Ub-activating enzyme |
| Ub-AMP | Ub-adenosine monophosphate |
| UBC/E2 | Ub-conjugating enzyme |
| Ube2s | Ubiquitin-conjugating enzyme E2s |
| Ub-G76 | Glycine 76 of Ub |
| WR | tryptophan repeat |
| WW | two conserved tryptophans |