| 4-PBA | 4-phenylbutyric acid |
| ACDase | Acid ceramidase |
| ActD | Actinomycin D |
| AMPA | α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid |
| ANO1 | Anoctamin 1 |
| aP2 | Adipocyte protein 2 |
| APC | Adenomatous polyposis coli |
| ATS | Anti-thymocyte serum |
| BCL10 | B-cell lymphoma 10 |
| BMAL1 | Brain and muscle Arnt-like protein 1 |
| C/EBP | CCAAT-enhancer-binding protein |
| CARD1 | Caspase recruitment domain family member 11 |
| Cav1.2 | Calcium channel, voltage-dependent, L-type, α1C subunit |
| CCL | C-C motif ligand |
| CLOCK | Clock circadian regulator |
| cFLIP | Cellular FLICE-like inhibitory protein |
| cGAS | Cyclic GMP-AMP synthase |
| cIAP2 | Cellular inhibitor of apoptosis protein 2 |
| CRY | Cryptochromes |
| DIM | 3,3’-diinodolylmethane |
| DUB | Deubiquitinating enzyme |
| E4BP4 | E4 promoter-binding protein 4 |
| EGF | Epidermal growth factor |
| EGFR | EGF receptor |
| EMT | Epithelial-mesenchymal transition |
| ENaC | Epithelial sodium channel |
| ERBB2 | Erythroblastic oncogene B2 |
| ERK | Extracellular signal regulate kinase |
| ERS | Endoplasmic reticulum stress |
| FASN | Fatty acid synthase |
| G-6-Pase | Glucose-6-phosphatase |
| GBB10 | Growth factor receptor-bound protein 10 |
| GM-CSF | Granulocyte macrophage-colony stimulating factor |
| GSK | Glycogen synthase kinase |
| HCC | Hepatocellular carcinoma |
| HER2 | Human epidermal growth factor receptor 2 |
| HFD | High fat diet |
| HMGA2 | High mobility group protein A2 |
| HSD1 | 11β-hydroxysteroid dehydrogenase 1 |
| HSP | Heat shock protein |
| IDOL | Inducible degrader of the LDLR |
| IFN | interferon |
| IκB | NF-κB inhibitor |
| IKK | IκB kinase |
| IL | Interleukin |
| Imd | Immune deficiency |
| IRF3 | Interferon regulatory factor 3 |
| ITCH | Itchy homolog |
| JAK | Janus kinase |
| JNK | c-Jun N-terminal kinase |
| KO | Knockout |
| LPS | Lipopolysaccharide |
| LV | Left ventricular |
| MALT1 | Mucosa-associated lymphoid translocation gene 1 |
| MAV5 | Mitochondrial antiviral signaling protein |
| MDA5 | Melanoma differentiation-associated gene 5 |
| MDM | Murine double minute |
| MEF | Mouse embryo fibroblast |
| Mφ | Macrophage |
| MMP | Matrix metalloprotease |
| msUsp2KO | Macrophage-selective Usp2KO |
| mTOR | Mammalian target of rapamycin |
| Nedd | Neural precursor cell expressed developmentally down-regulated protein |
| NF-κB | Nuclear factor-κB |
| NHERF4 | Na+/H+ exchange regulatory cofactor 4 |
| NOX | NADPH oxidase |
| OCT | Octamer binding protein |
| OXPHOS | Oxidative phosphorylation |
| PAI-1 | Plasminogen activator inhibitor-1 |
| PARP | Poly ADP-ribose polymerase |
| PBS | Phosphate-buffered saline |
| PCNA | Proliferating cell nuclear antigen |
| PEPCK | Phosphoenol pyruvate carboxykinase |
| PER | Period |
| PGC | PPARγ coactivator |
| PKA | Protein kinase A |
| PMA | Phorbol 12-myristate 13-acetate |
| PPAR | Peroxisome proliferator-activated receptor |
| PTS | Peroxisomal targeting signal 1 |
| pY701 | Phosphorylation at tyrosine 701 |
| RA | Rheumatoid arthritis |
| RIG-I | Retinoic acid-inducible gene-I |
| RIP1 | Receptor-interacting serine/threonine-protein kinase 1 |
| ROR | REV-ERB and retinoic acid receptor-related orphan receptor |
| SAPS | Scale for the assessment of positive symptoms |
| SCN | Suprachiasmatic nucleus |
| SeV | Sendai virus |
| siRNA | Small interfering RNA |
| SUMO | Small ubiquitin-related modifier |
| TAB | TAK1-binding protein |
| TAC | Transverse aortic construction |
| TAK1 | TGF-β-activated kinase 1 |
| TBK1 | TANK binding kinase 1 |
| TCR | T cell receptor |
| TGF | Transforming growth factor |
| TMBIM4 | Transmembrane BAX inhibitor motif containing 4 |
| TNF | Tumor necrosis factor |
| TNFR1 | TNF receptor 1 |
| TRADD | TNF receptor associated death domain protein |
| TRAF | TNF receptor-associated factor |
| TRAPV6 | Transient receptor potential vanilloid subfamily member 6 |
| TSG | Tumor suppressor gene |
| Tyk2 | Tyrosine kinase 2 |
| UCP2 | Uncoupling protein 2 |
| USP | Ubiquitin-specific protease |
| VSV | Vascular stomatitis virus |
| ZT | Zeitgeber time |