Skip to main content
. 2021 Feb 1;5:223. Originally published 2020 Sep 24. [Version 2] doi: 10.12688/wellcomeopenres.16291.2

Figure 2. Quality control of 10K genomes.

Figure 2.

Default EnteroBase criteria are indicated by vertical dashed lines. Numbers of genomes in the 10K project which passed these cut-off criteria are indicated in blue and failures in yellow, with the total numbers of failures near the tops of the figures in yellow. The quality criteria consisted of N50 ≥20,000, genomic assembly size between 4 MB and 5.8 MB, a maximum of 600 contigs and a low fraction of uncalled, low quality bases (N’s).