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. 2021 Feb 1;5:223. Originally published 2020 Sep 24. [Version 2] doi: 10.12688/wellcomeopenres.16291.2

Figure 7. Genomic diversity of 2955 genomes from HC100_4 from EnteroBase (18/08/2020) of which 208 were from the 10K genomes project (red perimeters).

Figure 7.

The figure shows a Ninja NJ ( Wheeler, 2009) tree of the numbers of different alleles between cgSTs as generated within EnteroBase using GrapeTree ( Zhou et al., 2018a). The geographical sources of all isolates are color-coded (Key at lower left) and the location of serovar Lubbock is shaded. Unshaded isolates are serovar Mbandaka. An interactive version can be found at http://enterobase.warwick.ac.uk/a/46122, in which the user can use other metadata for coloring genomes. Scale bar: 10 alleles.