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. Author manuscript; available in PMC: 2021 Feb 8.
Published in final edited form as: Am J Psychiatry. 2020 Jan 7;177(3):223–232. doi: 10.1176/appi.ajp.2019.19030256

TABLE 2.

Replication in independent cohorts in a study of genetic risk loci for anxietya

GAD-2 MVP European American Meta-Analysisb
iPSYCH Anxiety and Stress-Related Disorders (9)
UK Biobank, 23andMe, and GPC Neuroticism (31)
ANGST Anxiety (8)
RSID CHR Gene p Risk Allele p Risk Allele p Risk Allele p Risk Allele

rs4603973 3 SATB1-AS1 6.18E–11 G 0.181 G na na 0.0299 G
rs4390955 3 SATB1-AS1 7.78E–11 A 0.851 C 5.20E–04 A 0.2935 A
rs6557168 6 ESR1 1.33E–09 C 0.0128 C 0.367 C 0.170 C
rs12023347 1 LINC01360 /LRRIQ3 8.88E–09 T 6.61E–04 T 6.85E–04 T 0.00296 T
rs56226325 7 MAD1L1 2.01E–08 C 6.41E–04 C 6.59E–08 C 0.354 C
rs6090040 20 TCEA2 3.28E–08 C 0.461 A 0.444 A 0.867 C
a

Italic font indicates same direction of effect, and boldface indicates same direction of effect and nominal significance (p=0.05). The lead SNP on chromosome 3 near the SATB1 locus, rs4603973, was not available for lookup in the UK Biobank neuroticism genome-wide association study, so we used the strongest LD proxy available (rs4390955, R2=0.91, p=7.78E–11). ANGST=Anxiety Neuro Genetics Study; CHR=chromosome; GAD-2=Generalized Anxiety Disorder 2-item scale; GPC=Genetics of Personality Consortium; iPSYCH=Initiative for Integrative Psychiatric Research; MVP=Million Veteran Program; RSID=reference SNP cluster ID.

b

Results from the present study.