Table 1.
Closer investigation of genes with scores > 2 and genes with scores < 0.8
| PANTHER protein classes (padj < 0.05) of genes with scores > 2 | |
| Small GTPase (PC00208) | 4.21E−05 |
| Defense/immunity protein (PC00090) | 4.24E−05 |
| Antimicrobial response protein (PC00051) | 5.24E−05 |
| G-protein (PC00020) | 4.05E−04 |
| Protein class (PC00000) | 2.04E−03 |
| Unclassified | 2.44E−03 |
| Protein-binding activity modulator (PC00095) | 3.72E−02 |
| PANTHER protein classes (padj < 0.05) of genes with scores < 0.8 | |
| Extracellular matrix structural protein (PC00103) | 5.40E−06 |
| Extracellular matrix protein (PC00102) | 1.14E−05 |
| Unclassified | 2.68E−05 |
| Protein class (PC00000) | 3.57E−05 |
| Metabolite interconversion enzyme (PC00262) | 3.04E−02 |
| GO biological process terms (padj < 0.05) of genes with scores > 2 | |
| Cellular p (GO:0009987) | 2.62E−08 |
| mp (GO:0008152) | 4.62E−07 |
| Cellular mp (GO:0044237) | 2.85E−06 |
| Primary mp (GO:0044238) | 2.37E−05 |
| Organic substance mp (GO:0071704) | 3.02E−05 |
| Regulation of cellular mp (GO:0031323) | 9.82E−04 |
| Regulation of biosynthetic p (GO:0009889) | 9.92E−04 |
| Regulation of cellular biosynthetic p (GO:0031326) | 1.04E−03 |
| Regulation of cellular macromolecule biosynthetic p (GO:2000112) | 2.27E−03 |
| Regulation of macromolecule biosynthetic p (GO:0010556) | 2.52E−03 |
| Regulation of primary mp (GO:0080090) | 2.90E−03 |
| Macromolecule mp (GO:0043170) | 2.93E−03 |
| Regulation of nitrogen compound mp (GO:0051171) | 4.53E−03 |
| Regulation of RNA mp (GO:0051252) | 4.69E−03 |
| Positive regulation of biological p (GO:0048518) | 4.89E−03 |
| Response to organic substance (GO:0010033) | 4.91E−03 |
| Positive regulation of cellular p (GO:0048522) | 6.62E−03 |
| Regulation of RNA biosynthetic p (GO:2001141) | 6.67E−03 |
| Regulation of mp (GO:0019222) | 6.72E−03 |
| Regulation of nucleobase-containing compound mp (GO:0019219) | 6.74E−03 |
| Regulation of nucleic acid-templated transcription (GO:1903506) | 6.95E−03 |
| Developmental p (GO:0032502) | 7.01E−03 |
| Response to hormone (GO:0009725) | 7.25E−03 |
| Regulation of transcription, DNA-templated (GO:0006355) | 7.27E−03 |
| Response to oxygen-containing compound (GO:1901700) | 7.53E−03 |
| Anatomical structure development (GO:0048856) | 7.62E−03 |
| Nitrogen compound mp (GO:0006807) | 1.25E−02 |
| Response to endogenous stimulus (GO:0009719) | 1.48E−02 |
| Regulation of gene expression (GO:0010468) | 2.91E−02 |
| System development (GO:0048731) | 3.44E−02 |
| Regulation of macromolecule mp (GO:0060255) | 3.45E−02 |
| Cellular lipid mp (GO:0044255) | 4.10E−02 |
| Clathrin coat disassembly (GO:0072318) | 4.14E−02 |
| Multicellular organismal p (GO:0032501) | 4.19E−02 |
| Vesicle uncoating (GO:0072319) | 4.26E−02 |
| GO biological process terms (padj < 0.05) of genes with scores < 0.8 | |
| Cellular p (GO:0009987) | 6.35E−07 |
| mp (GO:0008152) | 1.35E−06 |
| Organic substance mp (GO:0071704) | 8.49E−06 |
| Cellular mp (GO:0044237) | 2.92E−05 |
| Nitrogen compound mp (GO:0006807) | 5.35E−04 |
| Primary mp (GO:0044238) | 5.76E−04 |
| Macromolecule mp (GO:0043170) | 3.82E−03 |
| Organonitrogen compound mp (GO:1901564) | 9.67E−03 |
| Localization (GO:0051179) | 4.87E−02 |
Significantly enriched PANTHER protein classes (padj < 0.05) as well as significantly enriched GO biological process terms (padj < 0.05) are shown
p: process; mp: metabolic process