Table 2. Recombination events detected within genes of large gene families in Brazil A4 and Y C6.
Brazil A4 | Y C6 | CL Brener | |||||||
---|---|---|---|---|---|---|---|---|---|
TS | MASP | Mucin | GP63 | TS | MASP | Mucin | GP63 | TS | |
# of genes | 1644 | 1118 | 700 | 411 | 1465 | 1066 | 797 | 427 | 3209 |
Kb length total | 3477.7 | 1011.9 | 352.1 | 460.6 | 2614.5 | 1115.2 | 458.9 | 619.7 | 4456.5 |
# of genes recombined | 793 | 145 | 38 | 70 | 479 | 154 | 73 | 89 | 787 |
# of recombination events | 2976 | 190 | 39 | 101 | 1334 | 221 | 85 | 153 | 2087 |
% of genes recombined | 48.2 | 13.0 | 5.4 | 17.0 | 32.7 | 14.4 | 9.2 | 20.8 | 24.5 |
Average events per gene | 1.8 | 0.2 | 0.1 | 0.2 | 0.9 | 0.2 | 0.1 | 0.4 | 0.7 |
Average events per kb | 0.9 | 0.2 | 0.1 | 0.2 | 0.5 | 0.2 | 0.2 | 0.2 | 0.5 |
Number of genes with ‘n’ number of recombination events | |||||||||
n = 1 | 137 | 111 | 37 | 51 | 162 | 110 | 61 | 58 | 324 |
n = 2 | 198 | 24 | 1 | 15 | 114 | 28 | 12 | 19 | 149 |
n = 3 | 98 | 9 | 0 | 1 | 66 | 11 | 0 | 3 | 110 |
n = 4 | 128 | 1 | 0 | 1 | 54 | 3 | 0 | 6 | 72 |
n = 5 | 68 | 0 | 0 | 1 | 33 | 2 | 0 | 1 | 52 |
n>5 | 164 | 0 | 0 | 1 | 50 | 0 | 0 | 2 | 80 |
Max of n | 18 | 4 | 2 | 5 | 12 | 5 | 2 | 6 | 12 |
Max of n: the highest number of recombination events detected for one gene.