Table 2.
Response to viruses | MiRNA family | Number of down-regulated target genes with the miRNA motif | Mean UPE | Mean expectation | Inhibition mechanism |
---|---|---|---|---|---|
CMV and TuMV | ath-miR5021 | 43 | 10.24 | 2.51 | Cleavage/translation |
ath-miR854 | 35 | 7.65 | 3 | Cleavage/translation | |
ath-miR5658 | 23 | 9.34 | 2.15 | Cleavage/translation | |
ath-miR172 | 19 | 16.77 | 2.31 | Cleavage/translation | |
ath-miR414 | 17 | 11.79 | 2.55 | Cleavage/translation | |
ath-miR157 | 9 | 16.99 | 3 | Cleavage/translation | |
ath-miR395 | 9 | 19.81 | 2.16 | Cleavage | |
ath-miR838 | 9 | 15.21 | 2.88 | Cleavage/translation | |
ath-miR156 | 8 | 13.83 | 2.75 | Cleavage/translation | |
ath-miR1886 | 7 | 9.52 | 2.78 | Cleavage/translation | |
ath-miR159 | 6 | 12.94 | 2.75 | Cleavage/translation | |
CMV and TCV | ath-miR5021 | 4 | 9.42 | 2.25 | Cleavage/translation |
ath-miR393 | 2 | 10.68 | 2.5 | Cleavage | |
ath-miR4239 | 1 | 19.93 | 2.5 | Cleavage | |
ath-miR414 | 1 | 10.44 | 3 | Cleavage | |
ath-miR838 | 1 | 9.92 | 3 | Translation |
UPE: maximum energy to unpair the target site