Table 6.
Inhibition constant, energy values of docking simulation of Mpro with compounds.
Mpro docking with compounds | Inhibition constant (μM) | Binding energy | Ligand efficiency | Intermolecular energy | vdW + Hbond + desolv energy | Electrostatic energy | Torsional energy | Total internal unbound | refRMS |
---|---|---|---|---|---|---|---|---|---|
Citronellol | 239.53 | –4.94 | –0.45 | –6.73 | –6.63 | –0.1 | 1.79 | –0.24 | 73.29 |
Eucalyptol | 50.78 | –5.86 | –0.53 | –5.86 | –5.86 | 0.0 | 0.0 | 0.0 | 73.76 |
Alpha-terpineol | 105.14 | –5.43 | –0.49 | –6.02 | –5.95 | –0.08 | 0.6 | –0.15 | 71.16 |
d-Limonene | 159.51 | –5.18 | –0.52 | –5.48 | –5.49 | 0.01 | 0.3 | –0.13 | 75.11 |
o-Cymene | 219.4 | –4.99 | –0.5 | –5.29 | –5.29 | 0.0 | 0.3 | –0.2 | 74.42 |
Alpha-pinene | 77.63 | –5.61 | –0.56 | –5.61 | –5.61 | 0.01 | 0.0 | 0.0 | 71.1 |
3-Carene | 103.88 | –5.43 | –0.54 | –5.43 | –5.44 | 0.0 | 0.0 | 0.0 | 74.49 |
All energy values are given in Kcal/mol.