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. 2021 Feb 11;16(2):e0245727. doi: 10.1371/journal.pone.0245727

Table 1. Group 4 capsule (G4C) coding gene cluster of different species in Dickeya.

SL. No Dickeya Strains G4C/O-antigen capsule cluster NCBI Accession
Size (Kb) No. Of ORF GC content (%)
G4C Group I
1 D. dianthicola GBBC 2039 22.3 20 52.5 AOOM01000000
2 D. dianthicola NCPPB 453 28.9 25 48.4 AOOB01000000
3 D. dianthicola DE440 28.9 25 48.4 PJJB00000000
4 D. dianthicola IPO 980 28.9 25 48.4 AOOS01000000
5 D. dianthicola ME23 28.9 25 48.4 CP031560
6 D. dianthicola RNS04.9 28.9 25 48.4 CP017638
7 D. dianthicola SS70 28.9 25 48.4 QESZ00000000
8 D. dianthicola WV516 28.9 25 48.4 PJJC00000000
9 D. dianthicola NCPPB 3534 28.9 25 48.4 AOOK01000000
10 D. dadantii NCPPB 898 31.3 27 48.9 AOOE01000000
11 D. dadantii DSM 18020 31.3 27 48.9 CP023467
12 D. dadantii NCPPB 3537 31.3 28 48.9 AOOL01000000
13 D. chrysanthemi NCPPB 516 31 27 47.6 AOOC00000000
14 D. sp. NCPPB 3274 36.1 31 50.2 AOOH01000000
15 D. dadantii 3937 32.1 26 48.1 CP002038
* D. paradisiaca NCPPB 2511 6.8 5 51.9 AONV01000000
G4C Group II
1 D. sp. 2B12 34.7 30 53.1 JSYG00000000
2 D. sp. FVG1-MFV-O17 34.7 30 53.1 RJLR00000000
3 D. sp. FVG10-MFV-A16 34.8 30 53.1 RJLS00000000
4 D. zeae EC1 34.8 30 50.8 CP006929
5 D. zeae DZ2Q 34.8 30 50.9 APMV00000000
6 D. zeae Ech586 34.8 30 51.4 CP001836
7 D. zeae MS1 34.9 30 51.2 APWM00000000
8 D. zeae NCPPB 3531 34.7 30 51.2 AOOI01000000
9 D. zeae ZJU1202 34.8 30 50.8 AJVN00000000
10 D. fangzhongdai B16 36.7 31 55.4 JXBN00000000
11 D. fangzhongdai S1 36.7 31 55.4 JXBO00000000
12 D. sp. MK7 36.7 31 55.4 AOOO01000000
13 D. sp. Secpp 1600 36.7 31 55.3 CP023484
14 D. fangzhongdai DSM 101947 37.8 32 55.2 CP025003
15 D. fangzhongdai M005 37.6 32 55.1 JSXD00000000
16 D. fangzhongdai ND14b 37.6 32 55.1 CP009460
17 D. fangzhongdai PA1 37.8 32 55.2 CP020872
18 D. dadantii subsp. dieffenbachiae NCPPB 2976 37.4 32 55.3 AOOG01000000
19 D. zeae MK19 35.6 31 51.2 AOOR01000000
20 D. zeae MS2 35.6 31 51.2 CP025799
21 D. zeae NCPPB 2538 35.6 31 51.2 AOOF01000000
22 D. zeae NCPPB 3532 35.6 31 51.2 AONW01000000
23 D. solani IPO 2222 35.9 31 54.8 CP015137
24 D. solani D s0432-1 35.9 31 54.8 CP017453
25 D. solani F012 35.9 31 54.8 PDVN00000000
26 D. solani GBBC 2040 35.9 31 54.8 AONX01000000
27 D. solani IFB0223 35.9 31 54.8 CP024710
28 D. solani IFB 0099 35.9 31 54.8 JXRS01000000
29 D. solani IFB_0158 35.9 31 54.8 PENA00000000
30 D. solani IFB_0221 35.9 31 54.8 PEMZ00000000
31 D. solani MK10 35.9 31 54.8 AOOP01000000
32 D. solani MK16 35.9 31 54.8 AOOQ01000000
33 D. solani PPO 9019 35.9 31 54.8 CP017454
34 D. solani PPO 9134 35.9 31 54.8 JWLT00000000
35 D. solani RNS 07.7.3B 35.9 31 54.8 JWLR00000000
36 D. solani RNS 08.23.3.1.A 35.9 31 54.8 CP016928
37 D. chrysanthemi NCPPB 3533 33.5 28 53.1 AOOJ00000000
38 D. solani RNS 05.1.2A 36.6 31 54.0 JWMJ00000000