Table 2.
Primers of virulence genes and desired ESBL genes in the genome of isolates.
| Genes | Primer | Sequence (5'-3') | Amplicon size (bp) | Reference (s) |
|---|---|---|---|---|
| Virulence | ||||
| PapC | F | GACGGCTGTACTGCAGGGTGGCG | 328 | [3] |
| R | ATATCCTTTCTGCAGGGATGCAATA | |||
| fimH | F | TACTGCTGATGGGCTGGTC | 640 | |
| R | GCCGGAGAGGTAATACCCC | |||
| iss | F | GGCAATGCTTATTACAGGATGTGC | 260 | |
| R | GAGCAATATACCCGGGCTTCC | |||
| Biofilm | F | GATTCAATTTTGGCGATTCCTGC | 225 | |
| R | TAATGAAGTCATTCAGACTCATCC | |||
| Stx1 | F | CGCTGAATGTCATTCGCTCTGC | 302 | |
| R | CGTGGTATAGCTACTGTCACC | |||
| Stx2 | F | CCTCGGTATCCTATTCCCGG | 516 | |
| R | CTGCTGTGACAGTGACAAAACGC | |||
|
| ||||
| ESBL | ||||
| blaCTX-M1 | F | GGTTAAAAAATCACTGCGTC | 863 | [4] |
| R | TTGGTGACGATTTTAGCCGC | |||
| blaCTX-M2 | F | ATGATGACTCAGAGCATTCG | 865 | |
| R | TGGGTTACGATTTTCGCCGC | |||
| blaCTX-M9 | F | ATGGTGACAAAGAGAGTGCA | 869 | |
| R | CCCTTCGGCGATGATTCTC | |||
| blaCTX-M15 | F | CACACGTGGAATTTAGGGACT | 995 | |
| R | GCCGTCTAAGGCGATAAACA | |||
| blaTEM | F | ATGAGTATTCAACATTTCCGC | 856 | |
| R | CAATGCTTAATCAGTGAGG | |||
| blaSHV | F | AAGATCCACTATCGCCAGCAG | 230 | |
| R | ATTCAGTTCCGTTTCCCAGCGG | |||