Skip to main content
. 2021 Feb 12;11:3726. doi: 10.1038/s41598-021-83257-2

Table 1.

Potential and binding energies of structures Fig. 3a–f.

Ligand Waters molecules exchangeda Potential energy (Hartrees)b Binding energy (kJ/mol)c
a Urea 1 − 3140.999223 − 77.73342713
b 2-MA 1 − 3140.994208 − 64.56565459
c Urea 2 − 3064.545142 22.46070774
d 2-MA 2 − 3064.555789 − 5.491864421
e AHA 3 − 2988.140894 − 8.180953242
f 2-MA 3 − 2988.079474 153.0776375

aThe number of water molecules exchanged with the ligand upon binding to the wild type active site.

bPotential energies are quoted for the unrestricted Becke, 3-parameter, Lee–Yang–Parr (B3LYP)4750 functional and 6-31G*/SDD basis sets51,52 (UB3LYP/6-31G*/SDD).

cBinding energies were calculated as potential energy of the structure plus the potential energies of any liberated water molecules (aqueous solvation with PCM, ε = 80), minus the potential energies of the wild type active site and aqueous solvated ligand (PCM, ε = 80). All calculated energies can be found in Supplementary Table 2.