Table 1.
Number of sRNA reads from eight samples* of sRNA pools aligned to hpRNAi construct and PPV-D RNA genome sequences.
Target sequence | “Elita” | “Startovaya” | Elita_RNAi1 | Elita_RNAi2 | St_RNAi1#1 | St_RNAi1#2 | St_RNAi2#1 | St_RNAi2#2 |
---|---|---|---|---|---|---|---|---|
PPV-D RNA | 5.3 | 18.2 | 13273.5 | 15509.6 | 11.2 | 10.1 | 13.4 | 112.5 |
hpRNAi | 10.6 | 29.3 | 20,380 | 30547.6 | 21.2 | 16.9 | 26.6 | 210.8 |
Eight samples of sRNA pools were extracted from two non-transgenic plants of cultivars “Startovaya” and “Elita,” two transgenic “Elita” lines (Elita_RNAi1 and Elita_RNAi2), and four samples of non-transgenic “Startovaya” scions grafted on transgenic rootstocks Elita_RNAi1 (two samples St_RNAi1#1 and St_RNAi1#2) or Elita_RNAi2 (two samples St_RNAi2#1 and St_RNAi2#2).