Table 2.

Main results of the identified SNPs

SNP	Chr	Position	Locus	EA/ OA	Closest gene	Discovery sample					Replication sample
						BMD		BS		Bivariate	UKB for BMD		deCODE for BS		Bivariate
						Beta	p	Beta	p	p	Beta	p	Beta	p	p
rs7575512	2	235210293	2q37.1	T/C	ARL4C	0.049	0.02	0.132	3.26 × 10−10	1.49 × 10−9	0.009	0.06	0.045	0.03	0.05
rs1040724	6	161575543	6q26	T/C	AGPAT4	0.115	4.01 × 10−5	0.140	3.95 × 10−7	1.95 × 10−8	0.008	0.05	0.005	0.75	0.03

Physical position is based on the human genome GRCH37 assembly

Chr chromosome, EA effect allele, OA other allele, Beta the regression coefficient of the effect allele, Closest gene the closest gene to which the SNP mapped