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. 2021 Feb 15;11(6):1555–1567. doi: 10.1016/j.apsb.2021.02.011

Table 2.

Cavity analysis for the predicted complex of RAI-S-37-bound SARS-CoV-2 RdRp. The total energy (kcal/mol) is the sum of van der Waals, electrostatic, polar solvation, and non-polar solvation. The residues are ranked by total energy. Only residues with binding energy greater than 0.5 kcal/mol are shown.

Residue van der Waals Electrostatic Polar solvation Non-polar solvation Total
G616 −0.31 −1.20 0.06 −0.01 −1.47
D761 −0.70 −12.41 12.01 −0.24 −1.34
K798 −0.43 −3.28 2.57 −0.13 −1.27
W617 −1.45 −1.31 1.60 −0.09 −1.24
W800 −1.09 −0.09 0.08 −0.07 −1.18
D618 −2.73 0.74 1.42 −0.36 −0.92
S814 −1.47 0.15 0.82 −0.31 −0.81
E811 −2.52 −8.50 10.69 −0.42 −0.75
S549 −0.58 −0.71 0.70 −0.13 −0.72
C799 −0.55 0.04 −0.19 −0.01 −0.71
A550 −0.47 −0.43 0.44 −0.08 −0.55