Table 1.
Description of Rhizoctonia spp. genome assembly.
| Assembly feature | JN | JNa* | JNb* | LY | XN |
|---|---|---|---|---|---|
| Estimated genome size (bp) | 97,392,847 | / | / | 49,083,502 | 41,800,569 |
| Scaffold count# | 36 | 16 | 16 | 19 | 21 |
| Assembly scaffold size (bp) | 96,407,277 | 49,565,071 | 46,725,450 | 48,655,841 | 41,104,060 |
| Scaffold N50 (bp) | 3,505,788 | 3,231,384 | 3,505,788 | 3,192,901 | 2,303,118 |
| GC% | 49.47 | 49.39 | 49.58 | 49.43 | 47.60 |
| Protein-coding genes | 29,028 | 14,978 | 14,043 | 14,549 | 12,349 |
| Chromosomes | 32 | 16 | 16 | 16 | 16 |
| Genes in chromosomes | 29,021 | 14,978 | 14,043 | 14,516 | 12,305 |
| Repetitive regions (%) | 19.9 | 22.81 | 16.86 | 20.88 | 20.82 |
| Heterozygosity (‰) | 0.19 | 0.22 | 0.16 | 0.64 | 2.56 |
*Subgenomes of JNa and JNb were divided from JN genome.
#Four scaffolds in JN (total 116,756 bp, predicted 7 genes, 0.12% of assembly size), three scaffolds in LY (253,844 bp, 33 genes, 0.52%), and five scaffolds in XN (400,287 bp, 44 genes, 0.97%) were not assembled into the chromosomes of each genome. Four scaffolds of JN could not be assigned to the JNa and JNb subgenomes.